Box plot with jittered points for showing number and significance of sQTL associations

xQTLvisual_sqtl(
  gene,
  geneType = "auto",
  axis_text_size = 1.3,
  axis_title_size = 1.3,
  title_size = 1.4,
  xlab_text = "",
  ylab_text = "",
  title_text = "",
  violin_color = NULL
)

Arguments

gene

(character) gene symbol or gencode id (versioned or unversioned are both supported).

geneType

(character) options: "auto","geneSymbol" or "gencodeId". Default: "auto".

axis_text_size

(numberic) text size of the axis labels

axis_title_size

(numberic) text size of the axis title

title_size

(numberic) text size of the title of the plot

xlab_text

(character) Lable for x-axis

ylab_text

(character) Lable for x-axis

title_text

(character) Title of the plot

violin_color

A character vector of violin plot color

Value

A ggplot object.

Examples

# \donttest{
xQTLvisual_sqtl(gene="KIF15")
# }